STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41076.1Pfam:pfam01261 Xylose isomerase-like TIM barrel. (305 aa)    
Predicted Functional Partners:
AMS41075.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Pfam:pfam02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Belongs to the TPP enzyme family.
 
 
 0.993
AMS41069.1
Pfam:pfam01261 Xylose isomerase-like TIM barrel.
 
 
  0.992
AMS41073.1
Inositol 2-dehydrogenase; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
 
 
 0.985
AMS41078.1
5-deoxyglucuronate isomerase; Pfam:pfam04962 KduI/IolB family.
 
  
 0.967
AMS41074.1
5-dehydro-2-deoxygluconokinase; Pfam:pfam09863 Uncharacterized protein conserved in bacteria (DUF2090).
  
 0.939
AMS39500.1
Myo-inositol 2-dehydrogenase; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
 
 0.924
AMS41077.1
Hypothetical protein.
 
     0.709
AMS39501.1
Hypothetical protein; Pfam:pfam01380 SIS domain.
 
     0.683
AMS41068.1
LacI family transcriptional regulator; Pfam:pfam13407 Periplasmic binding protein domain.
 
    0.636
AMS41070.1
Pfam:pfam13407 Periplasmic binding protein domain.
 
    0.541
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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