Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS41095.1Pfam:pfam01266 FAD dependent oxidoreductase. (384 aa)    
Predicted Functional Partners:
AMS41381.1
Aspartate racemase; Pfam:pfam01177 Asp/Glu/Hydantoin racemase.
   
 
  0.908
AMS40228.1
Putative D-amino acid aminotransferase; Pfam:pfam01063 Aminotransferase class IV.
     
 0.900
AMS42692.1
D-amino acid aminotransferase; Pfam:pfam01063 Aminotransferase class IV.
     
 0.900
AMS40885.1
Sarcosine oxidase subunit alpha; Pfam:pfam01571 Aminomethyltransferase folate-binding domain.
  
 
 0.636
AMS41906.1
(2Fe-2S)-binding protein; Pfam:pfam01571 Aminomethyltransferase folate-binding domain.
  
 
 0.636
AMS41096.1
Transcriptional regulator; Pfam:pfam12844 Helix-turn-helix domain.
  
  
 0.567
AMS41094.1
Peptide ABC transporter substrate-binding protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle.
       0.558
AMS41905.1
Pfam:pfam04268 Sarcosine oxidase, gamma subunit family.
 
 
 0.506
AMS41093.1
Beta-lactamase; Pfam:pfam00144 Beta-lactamase.
       0.502
AMS42028.1
Pfam:pfam01070 FMN-dependent dehydrogenase.
  
 
 0.425
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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