STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41122.1Transcriptional regulator, XRE family; Pfam:pfam01381 Helix-turn-helix. (204 aa)    
Predicted Functional Partners:
AMS41119.1
FAD-dependent oxidoreductase; Pfam:pfam13454 FAD-NAD(P)-binding.
 
     0.724
AMS41120.1
Hypothetical protein.
 
     0.721
AMS41121.1
Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
     0.717
AMS42874.1
Hypothetical protein; Pfam:pfam01381 Helix-turn-helix.
  
     0.666
AMS41898.1
XRE family transcriptional regulator; Pfam:pfam12844 Helix-turn-helix domain.
  
  
 0.649
AMS43343.1
XRE family transcriptional regulator; Pfam:pfam01381 Helix-turn-helix.
  
     0.639
AMS41123.1
Pfam:pfam02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain.
 
     0.633
AMS43842.1
Transcriptional regulator; Pfam:pfam07883 Cupin domain.
  
   
 0.553
AMS41389.1
Transcriptional regulator, XRE family protein; Pfam:pfam01381 Helix-turn-helix.
  
     0.509
AMS41116.1
Putrescine ABC transport system permease protein PotH.
       0.489
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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