STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41151.1Hypothetical protein. (1042 aa)    
Predicted Functional Partners:
AMS41153.1
Hypothetical protein; Pfam:pfam09931 Uncharacterized conserved protein (DUF2163).
   
   0.926
AMS41154.1
Glycoside hydrolase, family 24; Pfam:pfam09343 Conserved hypothetical protein 2217 (DUF2460).
   
   0.926
AMS41155.1
Hypothetical protein.
       0.784
AMS41150.1
Hypothetical protein.
       0.773
AMS41152.1
Hypothetical protein.
       0.773
AMS41149.1
Hypothetical protein.
       0.757
AMS39135.1
TonB-dependent receptor plug; Pfam:pfam00593 TonB dependent receptor.
   
 
 0.628
AMS39483.1
Hypothetical protein; Pfam:pfam00593 TonB dependent receptor.
   
 
 0.628
AMS42008.1
Pfam:pfam07715 TonB-dependent Receptor Plug Domain.
   
 
 0.628
AMS39134.1
ABC-type bacteriocin/lantibiotic exporter; Pfam:pfam00005 ABC transporter.
  
  
 0.614
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.