Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMS41158.1Hypothetical protein. (489 aa)    
Predicted Functional Partners:
AMS41169.1
Pfam:pfam05065 Phage capsid family.
   
   0.765
AMS40505.1
Hypothetical protein.
  
 
 0.723
AMS44255.1
Hypothetical protein; Pfam:pfam07411 Domain of unknown function (DUF1508).
    
   0.683
AMS41161.1
Hypothetical protein.
       0.648
AMS41162.1
Hypothetical protein.
       0.647
AMS43425.1
Hypothetical protein.
  
   0.645
AMS41160.1
Hypothetical protein.
       0.640
AMS41164.1
Hypothetical protein.
       0.638
AMS41159.1
Hypothetical protein.
       0.628
AMS41165.1
Hypothetical protein; Pfam:pfam13489 Methyltransferase domain.
  
    0.624
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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