Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AMS41169.1Pfam:pfam05065 Phage capsid family. (467 aa)    
Predicted Functional Partners:
AMS41171.1
Phage portal protein, HK97 family; Pfam:pfam04860 Phage portal protein.
 
 
 0.930
AMS41170.1
ATP-dependent Clp protease proteolytic subunit; Pfam:pfam00574 Clp protease; Belongs to the peptidase S14 family.
 
    0.785
AMS41158.1
Hypothetical protein.
   
   0.765
AMS42477.1
Modification methylase DpnIIB; Pfam:pfam01555 DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family.
 
    0.688
AMS42480.1
Terminase; Pfam:pfam05119 Phage terminase, small subunit.
 
   
 0.688
AMS41153.1
Hypothetical protein; Pfam:pfam09931 Uncharacterized conserved protein (DUF2163).
  
 
 0.669
AMS41154.1
Glycoside hydrolase, family 24; Pfam:pfam09343 Conserved hypothetical protein 2217 (DUF2460).
   
 
 0.664
AMS43185.1
Hypothetical protein.
   
   0.650
AMS43710.1
Nitrate/nitrite transporter protein; Pfam:pfam07690 Major Facilitator Superfamily.
   
    0.636
AMS40151.1
DNA methylase N-4/N-6 domain protein; Pfam:pfam01555 DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family.
 
    0.626
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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