STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41173.1Hypothetical protein. (142 aa)    
Predicted Functional Partners:
AMS41171.1
Phage portal protein, HK97 family; Pfam:pfam04860 Phage portal protein.
     
 0.836
AMS41172.1
Terminase; Pfam:pfam03354 Phage Terminase.
     
 0.836
AMS43197.1
Terminase.
  
  
 0.642
AMS43293.1
DNA methyltransferase; Pfam:pfam02086 D12 class N6 adenine-specific DNA methyltransferase.
  
    0.532
AMS41158.1
Hypothetical protein.
  
  
 0.495
AMS41175.1
Endonuclease.
       0.491
AMS41174.1
Hypothetical protein.
       0.460
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.