STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41208.1Endonuclease; Pfam:pfam09588 YqaJ-like viral recombinase domain. (317 aa)    
Predicted Functional Partners:
AMS41210.1
Pfam:pfam03837 RecT family.
 
  
 0.860
AMS41209.1
Hypothetical protein.
       0.782
AMS41200.1
Hypothetical protein.
       0.773
AMS41201.1
Hypothetical protein.
       0.773
AMS41202.1
Hypothetical protein.
       0.773
AMS41203.1
Hypothetical protein.
       0.773
AMS41204.1
Hypothetical protein.
       0.773
AMS41205.1
Hypothetical protein.
       0.773
AMS41206.1
Hypothetical protein.
       0.773
AMS41207.1
Hypothetical protein.
       0.773
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.