Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMS41229.1Chromosomal replication initiator DnaA domain protein; Pfam:pfam08299 Bacterial dnaA protein helix-turn-helix. (139 aa)    
Predicted Functional Partners:
AMS38945.1
DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 
 0.871
AMS41227.1
Viral (Superfamily 1) RNA helicase; Pfam:pfam13604 AAA domain.
  
  
 0.805
AMS41226.1
Hypothetical protein; Pfam:pfam08279 HTH domain.
     
 0.799
AMS41214.1
Exonuclease RNase T and DNA polymerase III; Pfam:pfam00929 Exonuclease.
     
 0.785
AMS41221.1
Pfam:pfam00929 Exonuclease.
     
 0.785
AMS41210.1
Pfam:pfam03837 RecT family.
       0.773
AMS41211.1
Hypothetical protein.
       0.773
AMS41212.1
Hypothetical protein.
       0.773
AMS41213.1
Hypothetical protein.
       0.773
AMS41215.1
Hypothetical protein.
       0.773
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.