STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41261.1Hypothetical protein. (589 aa)    
Predicted Functional Partners:
AMS40554.1
Hypothetical protein; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 0.797
AMS39425.1
Hypothetical protein.
 
     0.702
AMS42088.1
Pfam:pfam06674 Protein of unknown function (DUF1176).
  
     0.625
AMS41260.1
Hypothetical protein; Pfam:pfam12697 Alpha/beta hydrolase family.
 
 
   0.595
AMS42377.1
Pfam:pfam13505 Outer membrane protein beta-barrel domain.
  
   
 0.591
AMS41877.1
Pfam:pfam00535 Glycosyl transferase family 2.
 
   
 0.588
AMS42793.1
Kinesin.
  
     0.581
AMS41373.1
Hypothetical protein.
  
     0.577
AMS40522.1
PAS/PAC sensor hybrid histidine kinase; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
 0.551
AMS41472.1
Pfam:pfam00583 Acetyltransferase (GNAT) family.
  
     0.548
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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