STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41267.1Putative metal cation transporter; Pfam:pfam02535 ZIP Zinc transporter. (401 aa)    
Predicted Functional Partners:
AMS41266.1
Pfam:pfam07732 Multicopper oxidase.
 
   
 0.955
AMS42629.1
Pfam:pfam02683 Cytochrome C biogenesis protein transmembrane region.
  
    0.630
sodB
Superoxide dismutase, Fe; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.592
AMS43373.1
Pfam:pfam01545 Cation efflux family.
   
 0.581
AMS39608.1
Pfam:pfam04954 Siderophore-interacting protein.
   
    0.525
AMS40582.1
ATPase; Pfam:pfam00122 E1-E2 ATPase.
  
  
 0.515
AMS40743.1
Pfam:pfam01636 Phosphotransferase enzyme family.
  
    0.465
fumC
Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
    0.454
AMS40901.1
Pfam:pfam00465 Iron-containing alcohol dehydrogenase.
  
  
 0.433
AMS43936.1
Copper binding protein; Pfam:pfam04234 CopC domain.
 
     0.420
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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