Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS41288.1Hypothetical protein; Pfam:pfam13411 MerR HTH family regulatory protein. (114 aa)    
Predicted Functional Partners:
AMS41289.1
Transcriptional regulator, MerR family protein; Pfam:pfam07739 TipAS antibiotic-recognition domain.
 
     0.874
AMS42062.1
Pfam:pfam13411 MerR HTH family regulatory protein.
  
     0.550
AMS40239.1
AraC family transcriptional regulator; Pfam:pfam06445 GyrI-like small molecule binding domain.
  
 
 0.510
AMS41287.1
Ser/Thr protein phosphatase family protein; Pfam:pfam02872 5'-nucleotidase, C-terminal domain; Belongs to the 5'-nucleotidase family.
       0.495
AMS41692.1
Hypothetical protein; Pfam:pfam12146 Putative lysophospholipase.
  
  
 0.481
AMS43798.1
Alpha/beta hydrolase; Pfam:pfam13788 Domain of unknown function (DUF4180).
 
   
 0.454
AMS42884.1
Hypothetical protein; Pfam:pfam12697 Alpha/beta hydrolase family.
  
     0.425
AMS41388.1
Hypothetical protein; Pfam:pfam00440 Bacterial regulatory proteins, tetR family.
  
     0.403
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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