STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41288.1Hypothetical protein; Pfam:pfam13411 MerR HTH family regulatory protein. (114 aa)    
Predicted Functional Partners:
AMS41289.1
Transcriptional regulator, MerR family protein; Pfam:pfam07739 TipAS antibiotic-recognition domain.
 
     0.875
AMS42062.1
Pfam:pfam13411 MerR HTH family regulatory protein.
  
     0.550
AMS40239.1
AraC family transcriptional regulator; Pfam:pfam06445 GyrI-like small molecule binding domain.
  
 
 0.528
AMS41287.1
Ser/Thr protein phosphatase family protein; Pfam:pfam02872 5'-nucleotidase, C-terminal domain; Belongs to the 5'-nucleotidase family.
       0.495
AMS41692.1
Hypothetical protein; Pfam:pfam12146 Putative lysophospholipase.
 
  
 0.479
AMS43798.1
Alpha/beta hydrolase; Pfam:pfam13788 Domain of unknown function (DUF4180).
 
   
 0.456
AMS42884.1
Hypothetical protein; Pfam:pfam12697 Alpha/beta hydrolase family.
 
     0.426
dnaJ
Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]
  
 
 0.409
AMS40641.1
Molecular chaperone DnaJ; Pfam:pfam00226 DnaJ domain.
  
 
 0.409
AMS42760.1
Heat shock protein DnaJ domain-containing protein; Pfam:pfam00226 DnaJ domain.
  
 
 0.409
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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