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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41297.1Choline ABC transporter, periplasmic binding protein; Pfam:pfam04069 Substrate binding domain of ABC-type glycine betaine transport system. (311 aa)    
Predicted Functional Partners:
proW_2
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 0.999
AMS41299.1
Pfam:pfam00005 ABC transporter.
 
 0.995
AMS44313.1
Pfam:pfam00005 ABC transporter.
 
 0.982
AMS40754.1
Hypothetical protein; Pfam:pfam00005 ABC transporter.
 
 0.981
AMS40753.1
Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 0.956
AMS44314.1
Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 0.954
AMS40755.1
Glycine/betaine ABC transporter substrate-binding protein; Pfam:pfam04069 Substrate binding domain of ABC-type glycine betaine transport system.
     
  0.900
AMS44312.1
Pfam:pfam04069 Substrate binding domain of ABC-type glycine betaine transport system.
     
  0.900
betI-2
BetI family transcriptional regulator; Repressor involved in choline regulation of the bet genes.
 
     0.679
betI
HTH-type transcriptional regulator BetI; Repressor involved in choline regulation of the bet genes.
 
     0.591
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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