STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41311.1Pfam:pfam07090 Protein of unknown function (DUF1355). (693 aa)    
Predicted Functional Partners:
AMS41312.1
RNA-binding protein; Pfam:pfam13709 Domain of unknown function (DUF4159).
 
     0.954
AMS41313.1
Pfam:pfam01882 Protein of unknown function DUF58.
 
     0.953
AMS41314.1
ATPase AAA; Pfam:pfam07726 ATPase family associated with various cellular activities (AAA).
 
     0.930
AMS40680.1
Hypothetical protein; Pfam:pfam13779 Domain of unknown function (DUF4175).
  
     0.774
AMS41315.1
Pfam:pfam06938 Protein of unknown function (DUF1285).
 
     0.697
AMS38979.1
Cro/Cl family transcriptional regulator; Pfam:pfam01381 Helix-turn-helix.
  
     0.661
AMS43789.1
Hypothetical protein; Pfam:pfam09413 Domain of unknown function (DUF2007).
  
     0.647
AMS40399.1
TPR repeat-containing protein; Pfam:pfam13414 TPR repeat.
 
     0.619
AMS41317.1
Pfam:pfam01743 Poly A polymerase head domain; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
 
     0.617
AMS42744.1
ATP-binding protein; Pfam:pfam08904 Domain of unknown function (DUF1849).
  
     0.588
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.