Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS41325.1Hypothetical protein; Pfam:pfam14339 Domain of unknown function (DUF4394). (257 aa)    
Predicted Functional Partners:
AMS41323.1
Hypothetical protein; Pfam:pfam10099 Anti-sigma-K factor rskA.
 
     0.881
AMS41324.1
RNA polymerase sigma factor; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.697
AMS41153.1
Hypothetical protein; Pfam:pfam09931 Uncharacterized conserved protein (DUF2163).
   
   0.671
AMS41154.1
Glycoside hydrolase, family 24; Pfam:pfam09343 Conserved hypothetical protein 2217 (DUF2460).
   
   0.671
AMS39134.1
ABC-type bacteriocin/lantibiotic exporter; Pfam:pfam00005 ABC transporter.
  
  
 0.646
AMS38999.1
Pfam:pfam05114 Protein of unknown function (DUF692); Belongs to the UPF0276 family.
   
    0.519
AMS39135.1
TonB-dependent receptor plug; Pfam:pfam00593 TonB dependent receptor.
   
 
 0.515
AMS39483.1
Hypothetical protein; Pfam:pfam00593 TonB dependent receptor.
   
 
 0.515
AMS42008.1
Pfam:pfam07715 TonB-dependent Receptor Plug Domain.
   
 
 0.515
AMS41041.1
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
   
 
 0.506
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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