Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMS41332.1Hypothetical protein. (103 aa)    
Predicted Functional Partners:
AMS41331.1
ATP-binding cassette sub-family B member 6, mitochondrial-like; Pfam:pfam00005 ABC transporter.
       0.762
AMS42078.1
Hypothetical protein; Pfam:pfam10016 Predicted secreted protein (DUF2259).
  
     0.727
AMS44352.1
Pfam:pfam05656 Protein of unknown function (DUF805).
  
     0.617
AMS42949.1
Membrane protein.
  
     0.585
AMS40411.1
Pfam:pfam06698 Protein of unknown function (DUF1192).
  
     0.518
AMS44083.1
Phasin; Pfam:pfam09361 Phasin protein.
  
     0.515
AMS40668.1
Pfam:pfam09898 Uncharacterized protein conserved in bacteria (DUF2125).
  
     0.513
AMS40168.1
Hypothetical protein.
  
     0.507
AMS42944.1
Hypothetical protein; Pfam:pfam13480 Acetyltransferase (GNAT) domain.
  
     0.486
AMS41294.1
Hypothetical protein.
  
     0.458
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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