close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41356.1Hypothetical protein; Pfam:pfam10722 Putative bacterial sensory transduction regulator. (166 aa)    
Predicted Functional Partners:
AMS41357.1
tRNA-binding protein; Pfam:pfam01588 Putative tRNA binding domain.
       0.795
AMS40393.1
Pfam:pfam10073 Uncharacterized protein conserved in bacteria (DUF2312); Belongs to the UPF0335 family.
  
     0.646
AMS41355.1
Hypothetical protein; Pfam:pfam04380 Membrane fusogenic activity.
 
     0.628
atpF
F0F1 ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.618
AMS43432.1
Pfam:pfam04364 DNA polymerase III chi subunit, HolC.
  
     0.617
AMS41771.1
Hypothetical protein; Pfam:pfam04386 Stringent starvation protein B.
  
     0.613
AMS40643.1
Cobalt chelatase; Pfam:pfam06213 Cobalamin biosynthesis protein CobT.
  
     0.584
AMS40701.1
MFS transporter; Pfam:pfam01844 HNH endonuclease.
 
    0.568
AMS42744.1
ATP-binding protein; Pfam:pfam08904 Domain of unknown function (DUF1849).
  
     0.546
AMS43806.1
Membrane protein; Pfam:pfam09976 Tetratricopeptide repeat.
  
     0.544
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.