Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMS41429.1Hypothetical protein. (194 aa)    
Predicted Functional Partners:
AMS41293.1
ATPase AAA; Pfam:pfam00004 ATPase family associated with various cellular activities (AAA).
 
   
 0.718
AMS41295.1
Hypothetical protein.
  
     0.703
AMS41292.1
Hypothetical protein.
  
     0.695
AMS41294.1
Hypothetical protein.
  
     0.662
AMS41973.1
Transcriptional regulator.
  
     0.595
AMS41428.1
Pfam:pfam04342 Protein of unknown function, DUF486.
       0.590
AMS44094.1
Hypothetical protein; Pfam:pfam03572 Peptidase family S41.
 
 
 0.545
AMS38990.1
Hydantoinase; Pfam:pfam01968 Hydantoinase/oxoprolinase.
  
     0.531
AMS42817.1
Aldehyde-activating protein; Pfam:pfam04828 Glutathione-dependent formaldehyde-activating enzyme.
  
     0.522
AMS39956.1
Hypothetical protein; Pfam:pfam03567 Sulfotransferase family.
  
 
 0.494
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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