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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41460.1Thioredoxin reductase protein; Pfam:pfam07992 Pyridine nucleotide-disulphide oxidoreductase. (297 aa)    
Predicted Functional Partners:
AMS41459.1
Pfam:pfam02082 Transcriptional regulator.
 
   
 0.842
AMS39695.1
Thioredoxin; Pfam:pfam00085 Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.787
AMS43567.1
Peroxidase; Pfam:pfam00578 AhpC/TSA family.
  
 
 0.773
AMS43322.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
 
 
 0.762
AMS38947.1
Thiamine biosynthesis protein ThiF; Pfam:pfam00899 ThiF family.
  
  
 0.610
AMS39831.1
Thioredoxin; Pfam:pfam00085 Thioredoxin.
  
 
 0.600
AMS41080.1
TPR and WD-40 repeat-containing protein; Pfam:pfam13480 Acetyltransferase (GNAT) domain.
  
 
 0.574
secD
Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
  
  
 0.502
AMS39211.1
Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
     
 0.498
AMS40947.1
Glutamate synthase; Pfam:pfam01645 Conserved region in glutamate synthase.
     
 0.498
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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