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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41470.1Hypothetical protein; Pfam:pfam01035 6-O-methylguanine DNA methyltransferase, DNA binding domain. (193 aa)    
Predicted Functional Partners:
AMS40700.1
DNA-3-methyladenine glycosidase; Pfam:pfam00730 HhH-GPD superfamily base excision DNA repair protein.
 
  
 0.651
AMS41472.1
Pfam:pfam00583 Acetyltransferase (GNAT) family.
 
     0.580
AMS40670.1
Hypothetical protein; Pfam:pfam02805 Metal binding domain of Ada.
 
  
0.522
AMS41471.1
Pfam:pfam01464 Transglycosylase SLT domain.
       0.517
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
 
 
 
 0.480
AMS42453.1
ATPase AAA; Pfam:pfam12002 MgsA AAA+ ATPase C terminal.
 
   
 0.407
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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