Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS41471.1Pfam:pfam01464 Transglycosylase SLT domain. (364 aa)    
Predicted Functional Partners:
AMS41472.1
Pfam:pfam00583 Acetyltransferase (GNAT) family.
       0.768
AMS40799.1
Lipoprotein; Pfam:pfam03734 L,D-transpeptidase catalytic domain.
  
   
 0.567
AMS44053.1
ErfK/YbiS/YcfS/YnhG; Pfam:pfam03734 L,D-transpeptidase catalytic domain.
  
   
 0.562
AMS43627.1
Hypothetical protein; Pfam:pfam03734 L,D-transpeptidase catalytic domain.
  
   
 0.542
AMS42615.1
Phosphatidylcholine synthase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
    0.530
AMS41470.1
Hypothetical protein; Pfam:pfam01035 6-O-methylguanine DNA methyltransferase, DNA binding domain.
       0.519
AMS42718.1
ErfK/YbiS/YcfS/YnhG family protein; Pfam:pfam03734 L,D-transpeptidase catalytic domain.
  
   
 0.494
AMS39494.1
ErfK/YbiS/YcfS/YnhG protein; Pfam:pfam03734 L,D-transpeptidase catalytic domain.
  
   
 0.477
AMS42198.1
Hypothetical protein; Pfam:pfam05990 Alpha/beta hydrolase of unknown function (DUF900).
  
     0.437
AMS39772.1
Hypothetical protein; Pfam:pfam13406 Transglycosylase SLT domain.
  
   
 0.435
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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