close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41471.1Pfam:pfam01464 Transglycosylase SLT domain. (364 aa)    
Predicted Functional Partners:
AMS41472.1
Pfam:pfam00583 Acetyltransferase (GNAT) family.
       0.768
AMS40799.1
Lipoprotein; Pfam:pfam03734 L,D-transpeptidase catalytic domain.
 
     0.565
AMS44053.1
ErfK/YbiS/YcfS/YnhG; Pfam:pfam03734 L,D-transpeptidase catalytic domain.
 
     0.560
AMS43627.1
Hypothetical protein; Pfam:pfam03734 L,D-transpeptidase catalytic domain.
 
     0.540
AMS42615.1
Phosphatidylcholine synthase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
    0.531
AMS41470.1
Hypothetical protein; Pfam:pfam01035 6-O-methylguanine DNA methyltransferase, DNA binding domain.
       0.517
AMS41036.1
Pfam:pfam00006 ATP synthase alpha/beta family, nucleotide-binding domain.
  
  
 0.503
AMS41040.1
Pfam:pfam01052 Surface presentation of antigens (SPOA).
 
    0.503
fliE
Hypothetical protein; Pfam:pfam02049 Flagellar hook-basal body complex protein FliE.
  
  
 0.500
AMS42718.1
ErfK/YbiS/YcfS/YnhG family protein; Pfam:pfam03734 L,D-transpeptidase catalytic domain.
 
     0.492
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.