Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AMS41481.1Hypothetical protein; Pfam:pfam12840 Helix-turn-helix domain. (113 aa)    
Predicted Functional Partners:
AMS41480.1
Metallophosphoesterase; Pfam:pfam12850 Calcineurin-like phosphoesterase superfamily domain.
       0.773
AMS42016.1
Abortive infection protein.
  
     0.599
AMS41482.1
Hypothetical protein; Pfam:pfam07690 Major Facilitator Superfamily.
 
     0.579
AMS41829.1
Hypothetical protein; Pfam:pfam00296 Luciferase-like monooxygenase.
 
     0.503
AMS41484.1
Hypothetical protein; Pfam:pfam08241 Methyltransferase domain.
 
   
 0.498
AMS43878.1
Hypothetical protein; Pfam:pfam00196 Bacterial regulatory proteins, luxR family.
  
  
 0.460
AMS42061.1
Hypothetical protein; Pfam:pfam14399 NlpC/p60-like transpeptidase.
  
     0.440
AMS42114.1
Glyoxalase/bleomycin resistance protein/dioxygenase; Pfam:pfam12681 Glyoxalase-like domain.
 
     0.409
AMS39978.1
EcaC; Pfam:pfam14534 Domain of unknown function (DUF4440).
  
     0.404
AMS40729.1
Glyoxalase; Pfam:pfam12681 Glyoxalase-like domain.
 
     0.401
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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