Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AMS41484.1Hypothetical protein; Pfam:pfam08241 Methyltransferase domain. (169 aa)    
Predicted Functional Partners:
AMS41483.1
Hypothetical protein.
       0.773
AMS39503.1
MerR family transcriptional regulator.
  
     0.603
AMS40510.1
Integrase family protein.
  
   
 0.590
AMS44094.1
Hypothetical protein; Pfam:pfam03572 Peptidase family S41.
  
   
 0.564
AMS41482.1
Hypothetical protein; Pfam:pfam07690 Major Facilitator Superfamily.
       0.556
AMS41382.1
Hypothetical protein; Pfam:pfam00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
  
    0.543
AMS41485.1
AMP-dependent synthetase and ligase; Pfam:pfam00501 AMP-binding enzyme.
     
 0.516
AMS43518.1
Transcriptional regulator, repressor protein MphR(A).
  
 
   0.508
AMS41481.1
Hypothetical protein; Pfam:pfam12840 Helix-turn-helix domain.
 
   
 0.498
AMS43282.1
Peptide ABC transporter substrate-binding protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle.
 
     0.479
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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