STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41504.1Hypothetical protein; Pfam:pfam06059 Domain of Unknown Function (DUF930). (216 aa)    
Predicted Functional Partners:
AMS40411.1
Pfam:pfam06698 Protein of unknown function (DUF1192).
  
     0.602
AMS39768.1
Pfam:pfam04241 Protein of unknown function (DUF423).
  
     0.579
AMS40752.1
Hypothetical protein.
  
     0.564
AMS43507.1
Pfam:pfam13505 Outer membrane protein beta-barrel domain.
  
     0.563
AMS42035.1
Pfam:pfam02293 AmiS/UreI family transporter.
  
     0.555
AMS41505.1
Phospholipid N-methyltransferase PmtA; Pfam:pfam13659 Methyltransferase domain.
       0.547
AMS40267.1
Membrane protein.
  
     0.499
AMS41506.1
Hypothetical protein; Pfam:pfam00106 short chain dehydrogenase.
       0.483
AMS41892.1
Protein tyrosine/serine phosphatase.
  
     0.456
AMS41135.1
Pfam:pfam01261 Xylose isomerase-like TIM barrel.
  
     0.450
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.