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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41516.1Pfam:pfam11924 Protein of unknown function (DUF3442). (722 aa)    
Predicted Functional Partners:
AMS43941.1
NosL copper chaperone; Pfam:pfam05573 NosL.
  
 
 0.813
AMS43942.1
Membrane protein; Pfam:pfam12679 ABC-2 family transporter protein.
  
 
 0.779
AMS43946.1
Putative NosR; Pfam:pfam04205 FMN-binding domain.
  
  
 0.728
AMS41424.1
Hypothetical protein; Pfam:pfam14067 LssY C-terminus.
  
     0.664
AMS43494.1
Pfam:pfam13316 Protein of unknown function (DUF4087).
  
     0.653
AMS42818.1
Pfam:pfam13673 Acetyltransferase (GNAT) domain.
  
     0.636
AMS43407.1
Pfam:pfam15580 Immunity protein 33.
  
     0.603
AMS39821.1
Adhesin; Pfam:pfam03797 Autotransporter beta-domain.
  
     0.560
nosZ
Hypothetical protein; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family.
  
  
 0.538
AMS39041.1
Hypothetical protein; Pfam:pfam00583 Acetyltransferase (GNAT) family.
  
     0.535
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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