Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS41562.1Hypothetical protein. (62 aa)    
Predicted Functional Partners:
AMS41561.1
Ribulose-phosphate 3-epimerase; Pfam:pfam01522 Polysaccharide deacetylase.
       0.664
AMS41560.1
Proclavaminate amidinohydrolase Pah; Pfam:pfam00491 Arginase family; Belongs to the arginase family.
       0.651
AMS41557.1
Monosaccharide-transporting ATPase; Pfam:pfam00005 ABC transporter.
       0.547
AMS41558.1
Sugar ABC transporter permease; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
       0.547
AMS41559.1
ABC-type transporter, integral membrane subunit; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
       0.547
AMS41563.1
Pfam:pfam13520 Amino acid permease.
       0.413
AMS41556.1
Pfam:pfam02608 Basic membrane protein.
       0.401
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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