Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS41569.1Pfam:pfam11010 Protein of unknown function (DUF2848). (233 aa)    
Predicted Functional Partners:
AMS41566.1
Pfam:pfam01370 NAD dependent epimerase/dehydratase family.
  
    0.712
AMS41567.1
Pfam:pfam04115 Ureidoglycolate hydrolase.
       0.709
AMS41568.1
Putative xylanase/chitin deacetylase; Pfam:pfam01522 Polysaccharide deacetylase.
       0.709
AMS41564.1
Hypothetical protein; Pfam:pfam00106 short chain dehydrogenase.
  
   0.617
AMS41565.1
Hypothetical protein; Pfam:pfam01614 Bacterial transcriptional regulator.
       0.606
AMS41563.1
Pfam:pfam13520 Amino acid permease.
   
 
 0.514
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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