STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41573.1Pfam:pfam13520 Amino acid permease. (537 aa)    
Predicted Functional Partners:
AMS44170.1
Pfam:pfam11927 Protein of unknown function (DUF3445).
 
     0.609
AMS44168.1
Hypothetical protein.
 
     0.599
AMS39250.1
Alpha-glucosidase; Pfam:pfam00128 Alpha amylase, catalytic domain.
   
 0.561
AMS43648.1
Alpha-glucosidase; Pfam:pfam00128 Alpha amylase, catalytic domain.
   
 0.561
AMS44159.1
Pfam:pfam01571 Aminomethyltransferase folate-binding domain; Belongs to the GcvT family.
 
  
 0.531
AMS40762.1
Pfam:pfam01571 Aminomethyltransferase folate-binding domain; Belongs to the GcvT family.
 
  
 0.529
AMS41574.1
AraC family transcriptional regulator; Pfam:pfam13278 Putative amidotransferase.
       0.474
AMS40947.1
Glutamate synthase; Pfam:pfam01645 Conserved region in glutamate synthase.
  
  
 0.430
AMS44169.1
Dioxygenase subunit beta; Pfam:pfam00175 Oxidoreductase NAD-binding domain.
 
     0.423
AMS44378.1
Hypothetical protein; Pfam:pfam08592 Domain of unknown function (DUF1772).
  
     0.410
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.