Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS41575.1Pfam:pfam00294 pfkB family carbohydrate kinase. (311 aa)    
Predicted Functional Partners:
AMS41577.1
Hypothetical protein; Pfam:pfam03437 BtpA family.
 
     0.822
AMS41576.1
Hypothetical protein; Pfam:pfam04115 Ureidoglycolate hydrolase.
  
    0.786
AMS41578.1
Pfam:pfam00392 Bacterial regulatory proteins, gntR family.
 
   
 0.750
AMS41579.1
Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3.
       0.648
rbsK-2
Hypothetical protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
     0.628
rbsK
PfkB domain protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
     0.618
hisA
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Pfam:pfam00977 Histidine biosynthesis protein.
  
    0.528
AMS41580.1
Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3.
       0.461
AMS41581.1
Pfam:pfam00005 ABC transporter.
  
    0.433
AMS41070.1
Pfam:pfam13407 Periplasmic binding protein domain.
 
  
 0.414
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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