Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS41606.1Hypothetical protein; Pfam:pfam01614 Bacterial transcriptional regulator. (245 aa)    
Predicted Functional Partners:
AMS41605.1
Methylhydantoinase; Pfam:pfam01968 Hydantoinase/oxoprolinase.
 
   
 0.788
AMS41565.1
Hypothetical protein; Pfam:pfam01614 Bacterial transcriptional regulator.
  
     0.764
AMS44174.1
Hypothetical protein; Pfam:pfam09339 IclR helix-turn-helix domain.
  
     0.691
AMS41604.1
ABC transporter substrate-binding protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle.
 
     0.646
AMS41602.1
Cytochrome C550; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
     0.494
AMS41603.1
Peptide ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
     0.487
AMS40423.1
Hypothetical protein; Pfam:pfam09339 IclR helix-turn-helix domain.
  
     0.473
AMS41607.1
Hypothetical protein; Pfam:pfam01546 Peptidase family M20/M25/M40.
       0.440
AMS41600.1
Hypothetical protein; Pfam:pfam00005 ABC transporter.
       0.418
AMS41601.1
Pfam:pfam00005 ABC transporter; Belongs to the ABC transporter superfamily.
       0.418
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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