STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41611.1FAD-dependent oxidoreductase; Pfam:pfam01565 FAD binding domain. (473 aa)    
Predicted Functional Partners:
AMS41612.1
Hypothetical protein; Pfam:pfam07063 Domain of unknown function (DUF1338).
  
  
 0.792
AMS44057.1
2-hydroxy-acid oxidase; Pfam:pfam01565 FAD binding domain.
 
     0.664
AMS41610.1
Pfam:pfam00171 Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
     
 0.627
AMS40691.1
Pfam:pfam01012 Electron transfer flavoprotein domain.
 
 
 0.595
AMS41613.1
LysR family transcriptional regulator; Pfam:pfam03466 LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.
       0.540
AMS42028.1
Pfam:pfam01070 FMN-dependent dehydrogenase.
 
 0.512
AMS41911.1
Pfam:pfam01040 UbiA prenyltransferase family; Belongs to the UbiA prenyltransferase family.
  
 
 0.501
AMS40947.1
Glutamate synthase; Pfam:pfam01645 Conserved region in glutamate synthase.
     
 0.492
atpD
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
   
 0.411
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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