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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41620.1Hypothetical protein; Pfam:pfam00144 Beta-lactamase. (451 aa)    
Predicted Functional Partners:
AMS41396.1
Hypothetical protein; Pfam:pfam00144 Beta-lactamase.
  
     0.639
AMS41616.1
Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
       0.571
AMS41617.1
Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
       0.571
AMS41618.1
Hypothetical protein; Pfam:pfam00005 ABC transporter; Belongs to the ABC transporter superfamily.
       0.571
AMS41619.1
Hypothetical protein; Pfam:pfam00005 ABC transporter; Belongs to the ABC transporter superfamily.
       0.571
AMS41621.1
Hypothetical protein; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family.
 
     0.535
AMS41615.1
4-phytase; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle.
       0.533
AMS41622.1
Hypothetical protein; Pfam:pfam01266 FAD dependent oxidoreductase.
       0.418
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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