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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41647.1Oxidoreductase; Pfam:pfam00724 NADH:flavin oxidoreductase / NADH oxidase family. (366 aa)    
Predicted Functional Partners:
AMS40691.1
Pfam:pfam01012 Electron transfer flavoprotein domain.
  
 
 0.601
AMS41648.1
Amidase; Pfam:pfam01425 Amidase; Belongs to the amidase family.
  
    0.576
AMS41649.1
Pfam:pfam09860 Uncharacterized protein conserved in bacteria (DUF2087).
       0.565
AMS41646.1
Peptidase M14; Pfam:pfam04952 Succinylglutamate desuccinylase / Aspartoacylase family.
       0.505
AMS40299.1
CarD family transcriptional regulator; Pfam:pfam02559 CarD-like/TRCF domain.
  
    0.480
AMS41477.1
NADP-dependent oxidoreductase; Pfam:pfam00107 Zinc-binding dehydrogenase.
 
  
 0.439
AMS41650.1
Pfam:pfam07582 AP endonuclease family 2 C terminus.
       0.416
AMS39614.1
30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
   
    0.402
AMS40771.1
Pfam:pfam00248 Aldo/keto reductase family.
 
   
 0.400
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
    0.400
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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