Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMS41650.1Pfam:pfam07582 AP endonuclease family 2 C terminus. (352 aa)    
Predicted Functional Partners:
AMS41651.1
Oxidoreductase; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
 
  
 0.937
AMS39236.1
Hypothetical protein; Pfam:pfam01261 Xylose isomerase-like TIM barrel.
 
     0.740
AMS39235.1
Oxidoreductase; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
 
  
 0.535
AMS41648.1
Amidase; Pfam:pfam01425 Amidase; Belongs to the amidase family.
       0.532
AMS41649.1
Pfam:pfam09860 Uncharacterized protein conserved in bacteria (DUF2087).
       0.532
xylA
Pfam:pfam01261 Xylose isomerase-like TIM barrel; Belongs to the xylose isomerase family.
 
   
 0.469
AMS41078.1
5-deoxyglucuronate isomerase; Pfam:pfam04962 KduI/IolB family.
  
  
 0.445
AMS41074.1
5-dehydro-2-deoxygluconokinase; Pfam:pfam09863 Uncharacterized protein conserved in bacteria (DUF2090).
  
  
 0.420
AMS41647.1
Oxidoreductase; Pfam:pfam00724 NADH:flavin oxidoreductase / NADH oxidase family.
       0.415
AMS39415.1
Oxidoreductase; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
 
  
 0.404
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.