Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AMS41668.1Hypothetical protein; Pfam:pfam04357 Family of unknown function (DUF490). (1391 aa)    
Predicted Functional Partners:
AMS41667.1
Membrane protein; Pfam:pfam01103 Surface antigen.
 
 
 0.995
AMS41628.1
Hypothetical protein.
 
 
 0.915
AMS41827.1
Membrane protein.
 
  
 0.620
AMS40191.1
Pfam:pfam07940 Heparinase II/III-like protein.
  
     0.554
AMS42795.1
Organic solvent ABC transporter substrate-binding protein; Pfam:pfam02470 mce related protein.
 
   
 0.542
AMS39697.1
LuxR family transcriptional regulator; Pfam:pfam12705 PD-(D/E)XK nuclease superfamily.
 
     0.482
AMS39890.1
Membrane protein; Pfam:pfam02974 Protease inhibitor Inh.
  
     0.455
AMS41666.1
Membrane protein; Pfam:pfam07703 Alpha-2-macroglobulin family N-terminal region.
  
    0.444
AMS42793.1
Kinesin.
  
     0.439
bamA
Outer membrane protein assembly factor yaeT; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
     
 0.431
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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