Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS41673.1Pfam:pfam14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster. (450 aa)    
Predicted Functional Partners:
AMS40947.1
Glutamate synthase; Pfam:pfam01645 Conserved region in glutamate synthase.
 
 0.999
AMS41674.1
Dihydropyrimidine dehydrogenase subunit B; Pfam:pfam14697 4Fe-4S dicluster domain.
 0.999
AMS41681.1
Phenylhydantoinase; Pfam:pfam13594 Amidohydrolase.
 
 
 0.983
AMS41680.1
Allantoate amidohydrolase; Pfam:pfam01546 Peptidase family M20/M25/M40.
 
 
 0.961
AMS44299.1
Pfam:pfam01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit.
 
 
 0.934
AMS39257.1
Hypothetical protein; Pfam:pfam00175 Oxidoreductase NAD-binding domain.
   
 0.913
AMS40580.1
Hypothetical protein; Pfam:pfam00175 Oxidoreductase NAD-binding domain.
   
 0.913
AMS43860.1
Deaminase; Pfam:pfam07969 Amidohydrolase family.
  
 
  0.905
AMS44320.1
Cytosine deaminase; Pfam:pfam07969 Amidohydrolase family.
  
 
  0.905
deoA
Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family.
    
  0.901
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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