STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41696.1Pfam:pfam10908 Protein of unknown function (DUF2778). (428 aa)    
Predicted Functional Partners:
AMS40411.1
Pfam:pfam06698 Protein of unknown function (DUF1192).
  
     0.666
AMS41259.1
Hypothetical protein.
  
     0.596
AMS41695.1
Hypothetical protein; Pfam:pfam01545 Cation efflux family.
       0.588
AMS43610.1
Hypothetical protein.
  
     0.577
AMS44236.1
Hypothetical protein; Pfam:pfam01471 Putative peptidoglycan binding domain.
 
 
 0.575
AMS41892.1
Protein tyrosine/serine phosphatase.
  
     0.554
AMS42982.1
Membrane protein; Pfam:pfam06271 RDD family.
 
    0.554
AMS41250.1
Hypothetical protein.
 
 
 0.552
AMS42331.1
Pfam:pfam10098 Uncharacterized protein conserved in bacteria (DUF2336).
  
     0.519
AMS42146.1
Hypothetical protein; Pfam:pfam00122 E1-E2 ATPase.
   
  
 0.508
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.