Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS41721.1Pfam:pfam01464 Transglycosylase SLT domain. (236 aa)    
Predicted Functional Partners:
AMS40282.1
Pfam:pfam01464 Transglycosylase SLT domain.
  
     0.606
AMS41720.1
Pfam:pfam01510 N-acetylmuramoyl-L-alanine amidase.
     
 0.587
AMS44012.1
Lytic transglycosylase catalytic; Pfam:pfam01464 Transglycosylase SLT domain.
  
     0.575
AMS41719.1
Molecular chaperone DnaJ; Pfam:pfam05099 Tellurite resistance protein TerB.
       0.566
AMS44053.1
ErfK/YbiS/YcfS/YnhG; Pfam:pfam03734 L,D-transpeptidase catalytic domain.
  
   
 0.497
AMS43627.1
Hypothetical protein; Pfam:pfam03734 L,D-transpeptidase catalytic domain.
  
   
 0.472
AMS40843.1
Hypothetical protein.
 
    0.448
AMS40799.1
Lipoprotein; Pfam:pfam03734 L,D-transpeptidase catalytic domain.
  
   
 0.442
AMS42718.1
ErfK/YbiS/YcfS/YnhG family protein; Pfam:pfam03734 L,D-transpeptidase catalytic domain.
  
   
 0.409
AMS44051.1
Hypothetical protein; Pfam:pfam03734 L,D-transpeptidase catalytic domain.
  
   
 0.409
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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