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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41751.1Pfam:pfam05981 CreA protein. (162 aa)    
Predicted Functional Partners:
AMS41752.1
Antibiotic acetyltransferase; Pfam:pfam00132 Bacterial transferase hexapeptide (six repeats).
       0.660
AMS41750.1
Hypothetical protein.
       0.537
AMS41753.1
Hypothetical protein; Pfam:pfam04120 Low affinity iron permease.
       0.482
AMS41749.1
Photosynthetic protein synthase I; Pfam:pfam02630 SCO1/SenC.
       0.470
AMS41291.1
Membrane protein; Pfam:pfam10095 Uncharacterized protein conserved in bacteria (DUF2333).
  
    0.454
prmA
50S ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.
       0.441
AMS41754.1
Hypothetical protein.
       0.423
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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