Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AMS41753.1Hypothetical protein; Pfam:pfam04120 Low affinity iron permease. (126 aa)    
Predicted Functional Partners:
AMS41754.1
Hypothetical protein.
       0.672
AMS43331.1
Hypothetical protein; Pfam:pfam05974 Domain of unknown function (DUF892).
 
    0.577
AMS43673.1
Hypothetical protein; Pfam:pfam05974 Domain of unknown function (DUF892).
 
    0.576
AMS41752.1
Antibiotic acetyltransferase; Pfam:pfam00132 Bacterial transferase hexapeptide (six repeats).
       0.565
AMS43956.1
Nitrite reductase, copper-containing; Pfam:pfam00394 Multicopper oxidase; Belongs to the multicopper oxidase family.
  
 
 0.536
AMS41751.1
Pfam:pfam05981 CreA protein.
       0.482
AMS40578.1
Hypothetical protein; Pfam:pfam07731 Multicopper oxidase.
   
 
 0.471
AMS41266.1
Pfam:pfam07732 Multicopper oxidase.
   
 
 0.471
AMS42506.1
Pfam:pfam13298 DNA polymerase Ligase (LigD).
 
  
 0.468
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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