STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41769.1Arylsulfate sulfotransferase; Pfam:pfam13467 Ribbon-helix-helix domain. (75 aa)    
Predicted Functional Partners:
AMS41771.1
Hypothetical protein; Pfam:pfam04386 Stringent starvation protein B.
 
    0.824
AMS41770.1
Hypothetical protein; Pfam:pfam13770 Domain of unknown function (DUF4169).
       0.804
AMS41772.1
Pfam:pfam00440 Bacterial regulatory proteins, tetR family.
 
    0.558
AMS38952.1
Hypothetical protein; Pfam:pfam06347 Bacterial SH3 domain.
  
     0.478
AMS41355.1
Hypothetical protein; Pfam:pfam04380 Membrane fusogenic activity.
  
     0.475
AMS41356.1
Hypothetical protein; Pfam:pfam10722 Putative bacterial sensory transduction regulator.
  
     0.474
AMS41365.1
Pfam:pfam12802 MarR family.
  
     0.459
AMS43806.1
Membrane protein; Pfam:pfam09976 Tetratricopeptide repeat.
  
     0.437
AMS40643.1
Cobalt chelatase; Pfam:pfam06213 Cobalamin biosynthesis protein CobT.
 
     0.427
secE
Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.408
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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