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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41771.1Hypothetical protein; Pfam:pfam04386 Stringent starvation protein B. (179 aa)    
Predicted Functional Partners:
AMS41769.1
Arylsulfate sulfotransferase; Pfam:pfam13467 Ribbon-helix-helix domain.
 
    0.824
AMS40393.1
Pfam:pfam10073 Uncharacterized protein conserved in bacteria (DUF2312); Belongs to the UPF0335 family.
  
   
 0.798
AMS40437.1
Putative cytoplasmic protein; Pfam:pfam06242 Protein of unknown function (DUF1013).
  
   
 0.783
AMS41770.1
Hypothetical protein; Pfam:pfam13770 Domain of unknown function (DUF4169).
       0.777
AMS38952.1
Hypothetical protein; Pfam:pfam06347 Bacterial SH3 domain.
  
     0.754
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.753
atpF
F0F1 ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
   
 0.749
AMS39631.1
Pfam:pfam13417 Glutathione S-transferase, N-terminal domain.
  
     0.743
AMS42224.1
Pfam:pfam05071 NADH ubiquinone oxidoreductase subunit NDUFA12.
 
   
 0.733
AMS39697.1
LuxR family transcriptional regulator; Pfam:pfam12705 PD-(D/E)XK nuclease superfamily.
  
     0.717
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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