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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41791.1ATPase; Pfam:pfam01935 Domain of unknown function DUF87. (608 aa)    
Predicted Functional Partners:
AMS42210.1
Hypothetical protein.
  
     0.686
AMS40709.1
Hypothetical protein; Pfam:pfam13480 Acetyltransferase (GNAT) domain.
  
     0.543
AMS43508.1
Pfam:pfam10101 Predicted membrane protein (DUF2339).
 
     0.540
AMS41291.1
Membrane protein; Pfam:pfam10095 Uncharacterized protein conserved in bacteria (DUF2333).
  
     0.491
AMS43447.1
Hypothetical protein; Pfam:pfam00884 Sulfatase.
  
     0.479
AMS41294.1
Hypothetical protein.
  
     0.473
AMS41373.1
Hypothetical protein.
 
     0.463
AMS43569.1
Sel1 domain-containing protein repeat-containing protein.
 
     0.439
AMS44071.1
Pfam:pfam06078 Bacterial protein of unknown function (DUF937).
  
     0.418
AMS42091.1
Plasmid partitioning protein ParB; Pfam:pfam02195 ParB-like nuclease domain.
 
   
 0.404
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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