STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41802.1Ankyrin; Pfam:pfam12796 Ankyrin repeats (3 copies). (211 aa)    
Predicted Functional Partners:
AMS39498.1
Pfam:pfam08482 ATP-dependent helicase C-terminal.
    
 0.781
AMS40872.1
GlcNAc transferase; Pfam:pfam13414 TPR repeat.
 
 0.729
AMS41334.1
Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 0.716
AMS44303.1
Transcriptional regulator, LuxR family; Pfam:pfam12697 Alpha/beta hydrolase family.
  
 0.693
AMS39956.1
Hypothetical protein; Pfam:pfam03567 Sulfotransferase family.
  
 0.682
AMS42504.1
O-linked GlcNAc transferase; Pfam:pfam13414 TPR repeat.
 
 0.671
rpsC
30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.660
AMS43322.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.652
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 0.614
AMS41803.1
ATP-binding protein; Pfam:pfam13604 AAA domain.
   
 
 0.599
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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