Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMS41849.1CobW; Pfam:pfam02492 CobW/HypB/UreG, nucleotide-binding domain. (345 aa)    
Predicted Functional Partners:
AMS41848.1
Cobalt chelatase; Pfam:pfam02514 CobN/Magnesium Chelatase.
 
  
 0.940
AMS41850.1
Pfam:pfam07845 Protein of unknown function (DUF1636).
 
    0.865
AMS41846.1
Pfam:pfam02570 Precorrin-8X methylmutase.
 
   
 0.843
AMS41844.1
precorrin-3B C17-methyltransferase; Pfam:pfam00590 Tetrapyrrole (Corrin/Porphyrin) Methylases.
 
   
 0.828
AMS41845.1
Precorrin-2 C20-methyltransferase; Pfam:pfam00590 Tetrapyrrole (Corrin/Porphyrin) Methylases; Belongs to the precorrin methyltransferase family.
 
   
 0.827
AMS41847.1
Cobalamin biosynthesis protein CobG; Pfam:pfam03460 Nitrite/Sulfite reductase ferredoxin-like half domain.
 
   
 0.813
rpsN
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
 
 0.618
AMS41842.1
Precorrin-6Y C(5,15)-methyltransferase (Decarboxylating); Pfam:pfam00590 Tetrapyrrole (Corrin/Porphyrin) Methylases.
 
   
 0.575
dksA
Molecular chaperone DnaK; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.
  
  
 0.530
rpmB
Pfam:pfam00830 Ribosomal L28 family; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.502
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.