Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMS41850.1Pfam:pfam07845 Protein of unknown function (DUF1636). (144 aa)    
Predicted Functional Partners:
AMS41847.1
Cobalamin biosynthesis protein CobG; Pfam:pfam03460 Nitrite/Sulfite reductase ferredoxin-like half domain.
 
     0.915
AMS41848.1
Cobalt chelatase; Pfam:pfam02514 CobN/Magnesium Chelatase.
 
     0.878
AMS41849.1
CobW; Pfam:pfam02492 CobW/HypB/UreG, nucleotide-binding domain.
 
    0.865
AMS41845.1
Precorrin-2 C20-methyltransferase; Pfam:pfam00590 Tetrapyrrole (Corrin/Porphyrin) Methylases; Belongs to the precorrin methyltransferase family.
 
     0.854
AMS41846.1
Pfam:pfam02570 Precorrin-8X methylmutase.
 
     0.846
AMS41844.1
precorrin-3B C17-methyltransferase; Pfam:pfam00590 Tetrapyrrole (Corrin/Porphyrin) Methylases.
 
     0.838
AMS41842.1
Precorrin-6Y C(5,15)-methyltransferase (Decarboxylating); Pfam:pfam00590 Tetrapyrrole (Corrin/Porphyrin) Methylases.
 
     0.530
AMS39130.1
Precorrin-6A synthase, deacetylating; Catalyzes the methylation of C-1 in precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A.
 
     0.468
cobB
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
 
     0.426
AMS41843.1
Pfam:pfam02571 Precorrin-6x reductase CbiJ/CobK.
 
     0.412
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
Server load: low (14%) [HD]