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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41868.1methylmalonyl-CoA epimerase; Pfam:pfam13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. (134 aa)    
Predicted Functional Partners:
AMS43687.1
methylmalonyl-CoA mutase; Pfam:pfam02310 B12 binding domain.
  
 0.991
AMS39762.1
Pfam:pfam01642 Methylmalonyl-CoA mutase.
 
  
 0.982
AMS39765.1
methylmalonyl-CoA carboxyltransferase; Pfam:pfam01039 Carboxyl transferase domain.
 
 
 0.978
AMS43689.1
Methylmalonyl-CoA mutase, large subunit; Pfam:pfam01642 Methylmalonyl-CoA mutase.
 
  
 0.978
AMS39764.1
acetyl-CoA carboxylase; Pfam:pfam02786 Carbamoyl-phosphate synthase L chain, ATP binding domain.
 
 
 0.925
AMS43688.1
Putative enzyme; Pfam:pfam03308 ArgK protein.
 
  
 0.812
AMS41869.1
Pfam:pfam07330 Protein of unknown function (DUF1467).
       0.804
nuoI
NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
  
 0.673
AMS41866.1
Biotin; Pfam:pfam03099 Biotin/lipoate A/B protein ligase family.
  
    0.610
AMS41867.1
Beta-lactamase; Pfam:pfam00753 Metallo-beta-lactamase superfamily.
       0.597
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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