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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41907.1Hypothetical protein; Pfam:pfam04267 Sarcosine oxidase, delta subunit family. (99 aa)    
Predicted Functional Partners:
AMS41906.1
(2Fe-2S)-binding protein; Pfam:pfam01571 Aminomethyltransferase folate-binding domain.
 
 0.999
AMS41905.1
Pfam:pfam04268 Sarcosine oxidase, gamma subunit family.
 
 0.997
AMS40885.1
Sarcosine oxidase subunit alpha; Pfam:pfam01571 Aminomethyltransferase folate-binding domain.
 
 
 0.980
AMS41908.1
Sarcosine oxidase subunit beta; Pfam:pfam01266 FAD dependent oxidoreductase.
 
 
 0.963
AMS40886.1
Pfam:pfam04268 Sarcosine oxidase, gamma subunit family.
 
 
 0.955
AMS41964.1
Glycine cleavage system protein T; Pfam:pfam01266 FAD dependent oxidoreductase; Belongs to the GcvT family.
 
 
 0.910
AMS44316.1
FAD-dependent oxidoreductase; Pfam:pfam01571 Aminomethyltransferase folate-binding domain; Belongs to the GcvT family.
 
 
 0.905
gfa
Aldehyde-activating protein; Catalyzes the condensation of formaldehyde and glutathione to S-hydroxymethylglutathione; Belongs to the Gfa family.
     
  0.900
AMS41897.1
Dimethylglycine dehydrogenase; Pfam:pfam01266 FAD dependent oxidoreductase; Belongs to the GcvT family.
 
 
 0.888
AMS41894.1
FAD-dependent oxidoreductase; Pfam:pfam01571 Aminomethyltransferase folate-binding domain; Belongs to the GcvT family.
 
 
 0.886
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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