STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41909.1Pfam:pfam00924 Mechanosensitive ion channel. (831 aa)    
Predicted Functional Partners:
AMS41818.1
Endonuclease.
 
     0.543
AMS41910.1
Hypothetical protein.
       0.539
AMS42654.1
Pfam:pfam01914 MarC family integral membrane protein.
  
    0.527
AMS41906.1
(2Fe-2S)-binding protein; Pfam:pfam01571 Aminomethyltransferase folate-binding domain.
  
    0.512
AMS41907.1
Hypothetical protein; Pfam:pfam04267 Sarcosine oxidase, delta subunit family.
       0.499
AMS41908.1
Sarcosine oxidase subunit beta; Pfam:pfam01266 FAD dependent oxidoreductase.
       0.497
AMS41905.1
Pfam:pfam04268 Sarcosine oxidase, gamma subunit family.
       0.493
AMS41911.1
Pfam:pfam01040 UbiA prenyltransferase family; Belongs to the UbiA prenyltransferase family.
       0.431
AMS44078.1
Hypothetical protein; Pfam:pfam13502 AsmA-like C-terminal region.
 
    0.419
AMS41776.1
Pfam:pfam11015 Protein of unknown function (DUF2853).
  
     0.409
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.