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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41913.1Transporter. (144 aa)    
Predicted Functional Partners:
rfbB_2
Pfam:pfam01370 NAD dependent epimerase/dehydratase family.
 
  
 0.953
AMS41915.1
Pfam:pfam00202 Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
   
 0.914
AMS41911.1
Pfam:pfam01040 UbiA prenyltransferase family; Belongs to the UbiA prenyltransferase family.
 
     0.768
AMS44125.1
Hypothetical protein; Pfam:pfam13692 Glycosyl transferases group 1.
 
     0.746
AMS44123.1
Hypothetical protein.
  
     0.732
AMS44126.1
Pfam:pfam00535 Glycosyl transferase family 2.
 
     0.729
AMS44127.1
Hypothetical protein; Pfam:pfam04932 O-Antigen ligase.
 
     0.729
AMS41912.1
FAD-linked oxidase; Pfam:pfam01565 FAD binding domain.
 
     0.728
AMS41687.1
Glycosyltransferase; Pfam:pfam13231 Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
  
 0.642
AMS43776.1
Hypothetical protein; Pfam:pfam01183 Glycosyl hydrolases family 25.
  
     0.630
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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